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Shiimura Yuuki
Division of Molecular Genetics Institute of Life Science
Assistant Professor
Career
■ Career
- Apr. 2025 - Present
Kurume University, Molecular Genetics, Institute of Life Science, 講師 - Apr. 2017 - Present
Graduated school of medicine, Kyoto university, Cell Biology, Visiting Scholar - Apr. 2017 - Mar. 2025
Kurume University, Molecular Genetics, Institute of Life Science, 助教（任期制） - Jun. 2023 - Dec. 2023
School of Medicine, Stanford University, Molecular and Cellular Physiology (Kobilka Lab), Visiting Scholar - Sep. 2021 - Aug. 2022
School of Medicine, Stanford University, Molecular and Cellular Physiology (Kobilka lab), Visiting Scholar - Apr. 2016 - Mar. 2017
Kyoto University, Graduate School of Medicine, 特定研究員 - Apr. 2014 - Mar. 2016
Research Fellowships for Young Scientists (Japan Society for the Promotion of Science) - Apr. 2009 - Mar. 2011
Kyushu University of Health and Welfare, School of Pharmaceutical Sciences, 助手
- Apr. 2011 - Mar. 2015, Kurume University, Graduate School of Medicine
- Apr. 2007 - Mar. 2009, Kagoshima University, Graduate School of Medical and Dental Sciences
- Apr. 2003 - Mar. 2007, Kyushu University of Health and Welfare, School of Pharmaceutical Sciences
Research activity information
■ Award
■ Affiliated academic society
■ 共同研究実績
- Jul. 2024
内分泌学会, 内分泌代謝学サマーセミナーポスター賞 - Nov. 2023
日本心血管内分泌代謝学会, 高峰譲吉研究奨励賞 - May 2019
GPCR研究会, 松尾研究奨励賞 - Apr. 2018
The Japan Endocrine Society, Young Investigator Award
- Discovery of Feeding Regulatory Peptides and The Importance of Peptide Discovery Research.
Takanori Ida; Kazuma Matsui; Sayaka Nagata; Tomoya Nakamachi; Yuki Shiimura; Takahiro Sato; Masayasu Kojima
The Kurume medical journal, 18 Apr. 2025 - How the ghrelin receptor recognizes the acyl-modified orexigenic hormone
Yuki Shiimura; Masayasu Kojima; Takahiro Sato
Frontiers in Molecular Neuroscience, 07 Apr. 2025, [Reviewed], [Invited]
Lead, Corresponding - Virtual library docking for cannabinoid-1 receptor agonists with reduced side effects.
Tia A Tummino; Christos Iliopoulos-Tsoutsouvas; Joao M Braz; Evan S O'Brien; Reed M Stein; Veronica Craik; Ngan K Tran; Suthakar Ganapathy; Fangyu Liu; Yuki Shiimura; Fei Tong; Thanh C Ho; Dmytro S Radchenko; Yurii S Moroz; Sian Rodriguez Rosado; Karnika Bhardwaj; Jorge Benitez; Yongfeng Liu; Herthana Kandasamy; Claire Normand; Meriem Semache; Laurent Sabbagh; Isabella Glenn; John J Irwin; Kaavya Krishna Kumar; Alexandros Makriyannis; Allan I Basbaum; Brian K Shoichet
Nature communications, 06 Mar. 2025, [Reviewed] - A cryptic pocket in CB1 drives peripheral and functional selectivity.
Vipin Ashok Rangari; Evan S O'Brien; Alexander S Powers; Richard A Slivicki; Zachariah Bertels; Kevin Appourchaux; Deniz Aydin; Nokomis Ramos-Gonzalez; Juliet Mwirigi; Li Lin; Elizaveta Mangutov; Briana L Sobecks; Yaseen Awad-Agbaria; Manoj B Uphade; Jhoan Aguilar; Teja Nikhil Peddada; Yuki Shiimura; Xi-Ping Huang; Jakayla Folarin-Hines; Maria Payne; Anirudh Kalathil; Balazs R Varga; Brian K Kobilka; Amynah A Pradhan; Michael D Cameron; Kaavya Krishna Kumar; Ron O Dror; Robert W Gereau 4th; Susruta Majumdar
Nature, 05 Mar. 2025, [Reviewed] - The structure and function of the ghrelin receptor coding for drug actions
Yuki Shiimura; Dohyun Im; Ryosuke Tany; Hidetsugu Asada; Ryoji Kise; Eon Kurumiya; Hideko Wakasugi-Masuho; Satoshi Yasuda; Kazuma Matsui; Jun-ichi Kishikawa; Takayuki Kato; Takeshi Murata; Masayasu Kojima; So Iwata; Ikuo Masuho
Nature Structural & Molecular Biology, Mar. 2025
Lead, Corresponding - Ghrelin–LEAP2 interactions along the stomach–liver axis
Katsuya Sakai; Yuki Nakazato; Yuki Shiimura; Weidong Zhang; Masamitsu Nakazato
Endocrine Journal, 2025, [Reviewed] - Neurotransmitter recognition by human vesicular monoamine transporter 2.
Dohyun Im; Mika Jormakka; Narinobu Juge; Jun-Ichi Kishikawa; Takayuki Kato; Yukihiko Sugita; Takeshi Noda; Tomoko Uemura; Yuki Shiimura; Takaaki Miyaji; Hidetsugu Asada; So Iwata
Nature communications, 16 Sep. 2024, [Reviewed] - A µ-opioid receptor modulator that works cooperatively with naloxone.
Evan S O'Brien; Vipin Ashok Rangari; Amal El Daibani; Shainnel O Eans; Haylee R Hammond; Elizabeth White; Haoqing Wang; Yuki Shiimura; Kaavya Krishna Kumar; Qianru Jiang; Kevin Appourchaux; Weijiao Huang; Chensong Zhang; Brandon J Kennedy; Jesper M Mathiesen; Tao Che; Jay P McLaughlin; Susruta Majumdar; Brian K Kobilka
Nature, Jul. 2024, [Reviewed] - Acyl modifications in bovine, porcine, and equine ghrelins.
Takanori Ida; Hatsumi Tominaga; Eri Iwamoto; Akito Kurogi; Ayaka Okura; Kengo Shimada; Johji Kato; Atsutoshi Kuwano; Hirotaka Ode; Sayaka Nagata; Kazuo Kitamura; Takashi Yazawa; Miho Sato-Hashimoto; Masahiro Yasuda; Mikiya Miyazato; Yuki Shiimura; Takahiro Sato; Masayasu Kojima
Frontiers in endocrinology, 2024, [Reviewed] - Structural insights into the agonists binding and receptor selectivity of human histamine H4 receptor.
Dohyun Im; Jun-Ichi Kishikawa; Yuki Shiimura; Hiromi Hisano; Akane Ito; Yoko Fujita-Fujiharu; Yukihiko Sugita; Takeshi Noda; Takayuki Kato; Hidetsugu Asada; So Iwata
Nature communications, 20 Oct. 2023, [Reviewed] - Insights Into the Regulation of Offspring Growth by Maternally Derived Ghrelin.
Takahiro Sato; Takanori Ida; Yuki Shiimura; Kazuma Matsui; Kanae Oishi; Masayasu Kojima
Frontiers in endocrinology, 2022, [Reviewed] - Endogenous agonist–bound S1PR3 structure reveals determinants of G protein–subtype bias
Shintaro Maeda; Yuki Shiimura; Hidetsugu Asada; Kunio Hirata; Fangjia Luo; Eriko Nango; Nobuo Tanaka; Masayasu Toyomoto; Asuka Inoue; Junken Aoki; So Iwata; Masatoshi Hagiwara
Science Advances, Jun. 2021, [Reviewed] - Structure of the dopamine D2 receptor in complex with the antipsychotic drug spiperone
Dohyun Im; Asuka Inoue; Takaaki Fujiwara; Takanori Nakane; Yasuaki Yamanaka; Tomoko Uemura; Chihiro Mori; Yuki Shiimura; Kanako Terakado Kimura; Hidetsugu Asada; Norimichi Nomura; Tomoyuki Tanaka; Ayumi Yamashita; Eriko Nango; Kensuke Tono; Francois Marie Ngako Kadji; Junken Aoki; So Iwata; Tatsuro Shimamura
Nature Communications, Dec. 2020, [Reviewed] - Structure of an antagonist-bound ghrelin receptor reveals possible ghrelin recognition mode
Yuki Shiimura; Shoichiro Horita; Akie Hamamoto; Hidetsugu Asada; Kunio Hirata; Misuzu Tanaka; Kenji Mori; Tomoko Uemura; Takuya Kobayashi; So Iwata; Masayasu Kojima
Nature Communications, Aug. 2020, [Reviewed]
Lead - The Crystal Structure of Angiotensin II Type 2 Receptor with Endogenous Peptide Hormone
Hidetsugu Asada, Asuka Inoue, Francois Marie Ngako Kadji, Kunio Hirata, Yuki Shiimura, Dohyun Im, Tatsuro Shimamura, Norimichi Nomura, Hiroko Iwanari, Takao Hamakubo, Osamu Kusano-Arai, Hiromi Hisano, Tomoko Uemura, Chiyo Suno, Junken Aoki, So Iwata
Structure, Apr. 2020, [Reviewed] - Expression of the ghrelin/growth hormone secretagogue receptor axis and its functional role in promoting tumor growth in primary central nervous system lymphomas
Hiroko Muta, Yasuo Sugita, Takuya Furuta, Yuki Shiimura, Koichi Ohshima, Kazutaka Nakashima, Kensaku Sato, Motohiro Morioka, Hideyuki Abe, Takanori Nozawa, Yukihiko Fujii, Akiyoshi Kakita
Neuropathology, 10 Jan. 2020, [Reviewed] - Ligand binding to human prostaglandin E receptor EP4 at the lipid-bilayer interface
Yosuke Toyoda; Kazushi Morimoto; Ryoji Suno; Shoichiro Horita; Keitaro Yamashita; Kunio Hirata; Yusuke Sekiguchi; Satoshi Yasuda; Mitsunori Shiroishi; Tomoko Shimizu; Yuji Urushibata; Yuta Kajiwara; Tomoaki Inazumi; Yunhon Hotta; Hidetsugu Asada; Takanori Nakane; Yuki Shiimura; Tomoya Nakagita; Kyoshiro Tsuge; Suguru Yoshida; Tomoko Kuribara; Takamitsu Hosoya; Yukihiko Sugimoto; Norimichi Nomura; Miwa Sato; Takatsugu Hirokawa; Masahiro Kinoshita; Takeshi Murata; Kiyoshi Takayama; Masaki Yamamoto; Shuh Narumiya; So Iwata; Takuya Kobayashi
Nature Chemical Biology, Jan. 2019, [Reviewed] - Crystal structure of the human angiotensin II type 2 receptor bound to an angiotensin II analog
Hidetsugu Asada; Shoichiro Horita; Kunio Hirata; Mitsunori Shiroishi; Yuki Shiimura; Hiroko Iwanari; Takao Hamakubo; Tatsuro Shimamura; Norimichi Nomura; Osamu Kusano-Arai; Tomoko Uemura; Chiyo Suno; Takuya Kobayashi; So Iwata
Nature Structural & Molecular Biology, Jul. 2018, [Reviewed] - Regulation of the Human Ghrelin Promoter Activity by Transcription Factors, NF-kappa B and Nkx2.2
Yuki Shiimura; Hideko Ohgusu; Takahiro Sato; Masayasu Kojima
INTERNATIONAL JOURNAL OF ENDOCRINOLOGY, 2015, [Reviewed]
Lead - FABP3 and brown adipocyte-characteristic mitochondrial fatty acid oxidation enzymes are induced in beige cells in a different pathway from UCP1
Yuki Nakamura; Takahiro Sato; Yuki Shiimura; Yoshiki Miura; Masayasu Kojima
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, Nov. 2013, [Reviewed] - I-mfa domain proteins specifically interact with SERTA domain proteins and repress their transactivating functions
Shuichi Kusano; Yuki Shiimura; Yoshito Eizuru
BIOCHIMIE, Sep. 2011, [Reviewed]
- 心脈管疾患の予防と治療の新戦略 立体構造から探るグレリン受容体の分子認識機構と活性化機構
椎村 祐樹; 林 到げん; 谷猪 遼介; 浅田 秀基; 木瀬 亮二; 松井 一真; 佐藤 貴弘; 岩田 想; 増保 生郎; 児島 将康
血管, Jan. 2025 - 構造情報に立脚したグレリン受容体アゴニストの薬理プロファイル解析
椎村 祐樹; イム・ドヒョン; 谷猪 遼介; 浅田 秀基; 松井 一真; 岩田 想; 増保 生郎; 児島 将康
日本内分泌学会雑誌, Jun. 2024 - 構造情報を基づいたグレリン受容体アゴニストのシグナル活性の比較
椎村 祐樹; イム・ドヒョン; 谷猪 遼介; 木瀬 亮次; 松井 一真; 浅田 秀基; 岩田 想; 児島 将康; 増保 生郎
日本内分泌学会雑誌, Apr. 2024 - Structural insights into ghrelin receptor
椎村祐樹; 椎村祐樹; IM Dohyun; 浅田秀基; 松井一真; 岩田想; 児島将康
日本薬学会年会要旨集(Web), 2024 - 肥満における5G(GLP-1、GIP、Glucagon、Ghrelin、Gut hormone) 基礎研究と臨床研究 グレリン受容体の構造的洞察(The 5Gs in Obesity(GLP-1, GIP, Glucagon, Ghrelin and Gut hormone): Basic and Clinical Research Structural Insights into Ghrelin Receptor)
椎村 祐樹; Im Dohyun; Tany Ryosuke; Asada Hidetsugu; Matsui Kazuma; Masuho Ikuo; Iwata So; Kojima Masayasu
肥満研究, Nov. 2023 - 立体構造情報に基づいた、グレリン受容体のリガンド認識機構の解明
椎村 祐樹; 児島 将康
血管, Jun. 2021 - Protein Crystallography: Crystal structure of an antagonist-bound ghrelin receptor.
Yuki Shiimura; So Iwata; Masayasu Kojima
Spring-8/SACLA Research Frontiers 2020, 2021
Lead - グレリン受容体の立体構造を認識するモノクローナル抗体作製の試み
椎村祐樹; 堀田彰一朗; 浅田秀基; 平田邦生; 小林拓也; 岩田想; 児島将康
日本心血管内分泌代謝学会学術総会プログラム及び抄録集, 2018 - Physiological roles of ghrelin on obesity
Takahiro Sato; Takanori Ida; Yuki Nakamura; Yuki Shiimura; Kenji Kangawa; Masayasu Kojima
OBESITY RESEARCH & CLINICAL PRACTICE, Sep. 2014, [Reviewed] - 中枢性摂食異常症に関する調査研究 熱代謝の調節におけるグレリン作用の解析
児島将康; 佐藤貴弘; 椎村祐樹; 中村祐樹; 大石佳苗
中枢性摂食異常症に関する調査研究 平成24年度 総括・分担研究報告書, 2013 - Structure, regulation and function of ghrelin
Takahiro Sato; Yuki Nakamura; Yuki Shiimura; Hideko Ohgusu; Kenji Kangawa; Masayasu Kojima
JOURNAL OF BIOCHEMISTRY, Feb. 2012, [Reviewed] - マウス腎虚血再灌流障害におけるセロトニンの関与
椎村 祐樹; 武藤 純平; 比佐 博彰
日本薬理学雑誌, Mar. 2011 - 虚血性腎障害における腎交感神経とRho/ROCK経路の関与
武藤 純平; 椎村 祐樹; 比佐 博彰
日本薬理学雑誌, Mar. 2010 - I-mfaドメインタンパク質はSERTADドメインタンパク質と相互作用しその機能を抑制する
椎村 祐樹; 榮鶴 義人; 草野 秀一
日本生化学会大会・日本分子生物学会年会合同大会講演要旨集, Nov. 2008
- 立体構造から探るグレリン受容体の分子認識機構と活性化機構
椎村祐樹
第54回 日本心脈管作動物質学会, 01 Feb. 2025, [Invited] - Structural Insights into Ghrelin Receptor
Yuki Shiimura; Dohyun Im; Ryosuke Tany; Hidetsugu Asada; Kazuma Matsui; Ikuo Masuho; So Iwata; Masayasu Kojima
JKT Symposium on "The 5Gs in Obesity (GLP-1, GIP, Glucagon, Ghrelin and Gut hormone):Basic and Clinical Research", 26 Nov. 2023, [Invited]
■ Affiliated academic society
- Jul. 2024 - Present
日本心脈管作動物質学会 - Jun. 2024 - Present
The Japanese Pharmacological Society - Sep. 2023 - Present
日本肥満学会 - 2020 - Present
The Society of Cardiovascular Endocrinology and Metabolism - 2019 - Present
Japan Neuroendocrine Society - 2019 - Present
The Pharmaceutical Society of Japan - 2016 - Present
The Japan Endocrine Society
- Structural study of the initial transducer engagement by GPCR
Apr. 2024 - Mar. 2028 - Why is the acyl-modification of ghrelin necessary for activity?
Grant-in-Aid for Scientific Research (C)
Kurume University
01 Apr. 2020 - 31 Mar. 2023 - Cryo-EM structure of the ghrelin receptor coupled to an engineered heterotrimeric G protein
Fund for the Promotion of Joint International Research (Fostering Joint International Research (A))
Kurume University
Sep. 2021 - Nov. 2022 - グレリン受容体の結晶構造解析: なぜオクタン酸グレリンが受容体を刺激できるのか？
Apr. 2018 - Mar. 2021 - グレリン受容体発現細胞の免疫による立体構造認識抗体および機能性抗体の作出.
Apr. 2016 - Mar. 2018 - Monoclonal antibody that activates the ghrelin receptor and its application to the crystal structure analysis
Grant-in-Aid for Challenging Exploratory Research
Kurume University
Apr. 2014 - Mar. 2017 - GOAT及びグレリン受容体の立体構造に基づいたグレリン脂肪酸修飾・認識機構の解明.
Apr. 2014 - Mar. 2016 - 消化管幹細胞に特異的に発現するオーファン受容体LGR5のリガンド探索.
Apr. 2012 - Mar. 2013
- Advancing Drug Discovery Through Multilayered Crosstalk of GPCRs
Panel chair etc
APPW2025, 19 Mar. 2025
■ 共同研究実績
